USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q9BTE6 USC-OGP 2-DE database:  Q9BTE6 Q9BTE6 General information about the entry View entry in simple text format Entry name AASD1_HUMAN Primary accession number Q9BTE6 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Alanyl-tRNA editing protein Aarsd1; AltName: Full=Alanyl-tRNA synthetase domain-containing protein 1;. Gene name Name=AARSD1 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1162: pI=6.22; Mw=49435 Cross-references UniProtKB/Swiss-Prot Q9BTE6; AASD1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name AASD1_HUMAN Primary accession number Q9BTE6 Secondary accession number(s) B4DI73 Sequence was last modified on  February 6, 2007 (version 2) Annotations were last modified on  March 15, 2017 (version 133) Name and origin of the protein Description RecName: Full=Alanyl-tRNA editing protein Aarsd1; AltName: Full=Alanyl-tRNA synthetase domain-containing protein 1; Gene name Name=AARSD1 Encoded on Name=AARSD1 Keywords Alternative splicing; Complete proteome; Cytoplasm; Metal-binding; Phosphoprotein; Protein biosynthesis; Reference proteome; Zinc. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AK295447; BAG58385.1; -; mRNA EMBL CR608238; -; NOT_ANNOTATED_CDS; mRNA EMBL AC055866; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CH471152; EAW60903.1; -; Genomic_DNA EMBL BC004172; AAH04172.1; -; mRNA EMBL BC019324; AAH19324.1; -; mRNA CCDS CCDS58552.1; -. [Q9BTE6-1]; . RefSeq NP_001129514.2; NM_001136042.2. [Q9BTE6-3]; . RefSeq NP_001248363.1; NM_001261434.1. [Q9BTE6-1]; . RefSeq NP_079543.1; NM_025267.3. [Q9BTE6-2]; . UniGene Hs.317403; -; . ProteinModelPortal Q9BTE6; -; . BioGrid 123290; 86; . BioGrid 3190353; 7; . IntAct Q9BTE6; 121; . STRING 9606.ENSP00000386621; -; . BioMuta AARSD1; -; . DMDM 125987702; -; . REPRODUCTION-2DPAGE IPI00827636; -; . EPD Q9BTE6; -; . MaxQB Q9BTE6; -; . PaxDb Q9BTE6; -; . PeptideAtlas Q9BTE6; -; . PRIDE Q9BTE6; -; . DNASU 80755; -; . Ensembl ENST00000360221; ENSP00000353355; ENSG00000108825. [Q9BTE6-2]; . Ensembl ENST00000409399; ENSP00000386621; ENSG00000108825. [Q9BTE6-3]; . Ensembl ENST00000421990; ENSP00000409924; ENSG00000108825. [Q9BTE6-3]; . Ensembl ENST00000427569; ENSP00000400870; ENSG00000266967. [Q9BTE6-1]; . GeneID 100885850; -; . GeneID 80755; -; . KEGG hsa:100885850; -; . KEGG hsa:80755; -; . UCSC uc002icd.3; human. [Q9BTE6-1]; . CTD 100885850; -; . CTD 80755; -; . GeneCards AARSD1; -; . GeneCards PTGES3L-AARSD1; -; . HGNC HGNC:28417; AARSD1; . HGNC HGNC:43946; PTGES3L-AARSD1; . HPA HPA021408; -; . HPA HPA022869; -; . HPA HPA023714; -; . MIM 613212; gene; . neXtProt NX_Q9BTE6; -; . OpenTargets ENSG00000108825; -; . OpenTargets ENSG00000266967; -; . PharmGKB PA142670464; -; . eggNOG KOG2105; Eukaryota; . eggNOG KOG3158; Eukaryota; . eggNOG COG2872; LUCA; . GeneTree ENSGT00510000046493; -; . HOGENOM HOG000230967; -; . HOVERGEN HBG080017; -; . InParanoid Q9BTE6; -; . KO K07050; -; . OMA GQPCDYG; -; . OrthoDB EOG091G0K2Q; -; . PhylomeDB Q9BTE6; -; . TreeFam TF323735; -; . ChiTaRS AARSD1; human; . PRO PR:Q9BTE6; -; . Proteomes UP000005640; Chromosome 17; . Bgee ENSG00000108825; -; . CleanEx HS_AARSD1; -; . ExpressionAtlas Q9BTE6; baseline and differential; . Genevisible Q9BTE6; HS; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0004813; F:alanine-tRNA ligase activity; IEA:InterPro; . GO GO:0005524; F:ATP binding; IEA:InterPro; . GO GO:0046872; F:metal ion binding; IEA:UniProtKB-KW; . GO GO:0003676; F:nucleic acid binding; IEA:InterPro; . GO GO:0002196; F:Ser-tRNA(Ala) hydrolase activity; IEA:Ensembl; . GO GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro; . InterPro IPR018165; Ala-tRNA-synth_IIc_core; . InterPro IPR018164; Ala-tRNA-synth_IIc_N; . InterPro IPR018163; Thr/Ala-tRNA-synth_IIc_edit; . InterPro IPR009000; Transl_B-barrel; . InterPro IPR012947; tRNA_SAD; . Pfam PF01411; tRNA-synt_2c; 1; . Pfam PF07973; tRNA_SAD; 1; . SMART SM00863; tRNA_SAD; 1; . SUPFAM SSF50447; SSF50447; 1; . SUPFAM SSF55186; SSF55186; 1; . PROSITE PS50860; AA_TRNA_LIGASE_II_ALA; 1; .

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